W

Whole-Genome-Sequencing

a fast xenograft read sorter based on space-efficient k-mer hashing, efficiently paralellized, written in jit-compiled Python using numba. Since 2.1.0, xengsort supports also WGBS data in addition to RNA-seq, whole genome and exome data.

Modules for genotyping and characterisation of bacterial isolates utilizing whole-genome-sequencing data